LOCUS AF023530 10054 bp DNA ROD 16-DEC-1997

DEFINITION Mus musculus RNA helicase A (Ddx9) gene, partial cds.

ACCESSION AF023530 NID g2688939

KEYWORDS .

SOURCE house mouse.

ORGANISM Mus musculus

Eukaryotae; Metazoa; Chordata; Vertebrata; Mammalia; Eutheria; Rodentia; Sciurognathi; Muridae; Murinae; Mus.

REFERENCE 1 (bases 1 to 10054)

AUTHORS Lee,C.G., Eki,T., Okumura,K., Soares,V.C. and Hurwitz,J.

TITLE Molecular analysis of the cDNA and genomic DNA encoding mouse RNA helicase A

JOURNAL Unpublished

REFERENCE 2 (bases 1 to 10054)

AUTHORS Lee,C.G. and Hurwitz,J.

TITLE Direct Submission

JOURNAL Submitted (09-SEP-1997) Molecular Biology Box 97, Memorial Sloan-Kettering Cancer Center, 1275 York Avenue, New York, NY 10021, USA

FEATURES Location/Qualifiers source 1..10054 /organism="Mus musculus" /db_xref="taxon:10090" /chromosome="1" /map="MGD position 67 between D1Mit14 and D1Hun40" mRNA join(<4392..4502,5360..5500,6992..7109,9262..>9374) /gene="Ddx9" /product="RNA helicase A" gene <4392..>9374 /gene="Ddx9" CDS join(4392..4502,5360..5500,6992..7109,9262..>9374) /gene="Ddx9" /note="similar to D. melanogaster maleless protein; RNA/DNA helicase" /codon_start=1 /product="RNA helicase A" /db_xref="PID:g2688940" /

translation="MGDIKNFLYAWCGKRKMTPAYEIRAVGNKNRQKFMCEVRVEGFN YAGMGNSTNKKDAQSNAARDFVNYLVRINEVKSEEVPAVGIVPPPPILSDTSDSTASA AEGLPAPMGGPLPPHLALKAEENNSGVESSGYGAPGPTWDRGANLKDYYSRKEEQEVQ A"

BASE COUNT 2737 a 1936 c 2288 g 3091 t 2 others

ORIGIN

1 gcggccgcga gctcaattaa ccctcactaa agggagtcga ctcgatctca ttatgttgcc 61 ctggccttcc ttaaacatag accagactgt tttgaactta cggaggtctg tcagtctctg 121 tttcctgggt gctgtgactg gaggcaagtg ccaccatgct acacactgcc tgcagcattt 181 tatttctttt cttttttctt tttcttttgg tttttcgaga cagggtttct ctgtgtaggc 241 ttggctgacc tggaagtgac tttgtagacc aggctggcct cgaactcaga aatctgcctg 301 cctctgcctc ccaactgctg ggattaaaga tgcgccacta ctgcccggct gcctgcagna 361 ttttgatgaa gcagaaatac ttcagtcctt gtattttaac acagcaccca taaatacatt 421 gctttggcat attttaaagt ggctattctg ataaagtctg aaaggattaa tcctgtaaca 481 ctgcccttac gtaagataaa ctatcaaaaa ggtgatccat ggtggcatgt ctctaaattt 541 tgccttcaga ggtggaggca agtggactgc gttaagtggt gggctagctt gctctacaaa 601 gacaagacaa gcaaggagac ataacttcca gaaaccaagc tggttagcga ctacaggaaa 661 ttatgggcct aggcagcaga tctcgcgcga cctcaggttt ggcgcccgga agtggttcaa 721 gccccgcccc cgggtcgctg gctccggagt tggcctacgc gccaggccag tcgccgactc 781 cgccccctgg gtcctgcagt cggagccatt tcgccgctgc ttccatgcgg gtgaggtgtg 841 ttctttcgcc gttctcgtgg aaggttggcg ctgcgaactc gcctaagaag gctgtgctct 901 cgggcacgga agagcggagg agggtaagaa aggggggcgt tgcggccccg gacgcgggct 961 cattgctgcg ggccgacgcc ggcctccgcg gcggtcagcc gtggctttgt tgttgaggcg 1021 cgggcgggcg agcgtgtggg ggaggggcag cgcggcgggt acccggattt acgggccgtg 1081 ggcgcctcgc gagcggagct cccgtggccc taggcctggg gttccttgca cagactggcc 1141 tctctcggag gcctcttcct cactcggcct gactttcggc gggtgtctgt aatcagttgc 1201 gtgtaggggt agcggctcga ctggacccgg gccgtggtgg tggggggtcg tccgcggttc 1261 taatccggga cacccgggcc ccgtggggtg cccgctttgg ggtccggggc ttcgctgcag 1321 gtcctcccgc tccgcactgg tgacggggca tggctgggtg gggcgggatg aggagcaggt 1381 ggtaggaaaa tgaatgcatg atttagtaag tgatggcgga attacaccgc gcaacgggat 1441 agccccgctg tagataacgg tcgaaaggga gggcgcctca gtctgagggg tgcacgagcc 1501 tgagtctggc tttgaggtgc acagtgtatc cgctccaaag ggcaatgaga gatcagttac 1561 gcctaaggcc agaccttcct ggaggaaggg agggccggcc acgtgacctg agggtgcgaa 1621 aagagatgaa agaatttgtt tccgggtggc aagaatgaaa acacaaaatt gggagccatg 1681 actctagcct ttcattccag cactggggtt tggtggtgga aggtattgtt cgatctcttg 1741 agtccggggc tactacacat agaaatcttg tctcataaaa caaaatttga tttattccga 1801 tatgtgtgtg tatacgagta tacgtatcag gtagtggtgg caagtgagag aggagctgta 1861 gaaaaacaaa cgagtaatag tggaggcatt tctggagcca aaacagcagg gcagatgtga 1921 catgatggaa aatttggcat ccatctaggc tctcgacaag aggataagtt ctaggtctgt 1981 aaaagaagtt gtggggtttt tgtttgtttt tttggttttt cgagataggg tttcctctgt 2041 atagctccag ctatcctgga actcactctg tagaccaggc tggcctcgaa ctcaaatccg 2101 cctgccactg cctaccaagt gctgggatta aaggtgtatg ctaccacgcc cagcttgcta 2161 ttttatgtaa ataactacac tgtagctgtc tttggaaaca ccagaagagg gcatcatctc 2221 attacagatg gttgtgagcc actatgtggt tgttgggatt tgaactcagg acctctggaa 2281 gagcagtcat tgctcttaac cgctgagtat ttctaggggg ccatttatac tctttattct 2341 ccagttttct taaatttcct cagttcaaag taataaaagt aaaaccaaac agtacaatag 2401 gcagtttaag gattaaatag ttcctaatct actaaggata tcagcaccac tttaaggatt 2461 caagaaatag ctgtgaaaga tctttgggga tcggattaga atttccaatt gtgaagttgg 2521 gttgcaacta agaatatact taggtataaa tttattactg agatgcctag ttagtttata 2581 gatgggaata ttagtatttt cctcgggtaa attttggagc cttaagggct gtatcgatct 2641 gtttggactt agttagcatg aatgtttaaa attaaatggg ttttctagag acaaaggggt 2701 ttgataggcc ctatattttg ttactcattt actttgtaca tttacttatg ttgggggttt 2761 ttgttttgga gacagggttt ctctgtagac ttggtagcct ccaacttaaa gagatcagcc 2821 cttctctgct ctccaagtgc tggaattaaa tgcctgagcc agaacagcca gacttgtgaa 2881 ggagtctatt gtctttagct tctttttgtt ttttcgagac agggtttctc ttctttagca 2941 ctagctgtcc tgggattcac tctgtagacc aggctggcct ctatgtcttt agcttctgaa 3001 tttgtattat ctggctttgt catctgcttt accaaatgac tagtcaaagt tggtgagcca 3061 caagactatt ggggtcagat ttggttggtg tgcgatgtca ttttacagct tactgtagta 3121 atagatctcc tctcctctgt tctaaatgat ttttttttaa tgcatgaata ttttgtgggt 3181 atgtatatgt accatttgcc agaagagggc cttggctccc ttggggctac agttatgaat 3241 gtgtatatgc aagtcacctt gtgatgctag gaatcaaacc aaggtcctct gaaagagaaa 3301 tggctgtaag agaaagcact gagccatctc cagccccaag aagtttttgt tttgagattg 3361 tctcactatg taatcatagg aggcctagaa ctggttatgt aaatcagagt ggccttaaaa 3421 aactgctggc ccctccctgg tttttggtct gtttatggta gctgaagcca gtctaggcta 3481 taggtcaaaa taaaggtttt atttagattt tagcttgatt atatacaaat tgtggccatt 3541 tctgtagttt tggtgggttt agtttgtgga gagtgctata tgtaacccca agtaaacttc 3601 tgttcatagc catcttccaa gtgaaggtta ctgggtacct tgagaggtct gaacccttag 3661 agccagtgat gtttgccagt cgcaagtggc tgaatctgta tcttctccaa gatcagtaag 3721 tgatcctaac cactgagcca tcttatcttt tttctatttc attttcactt aaaatttctc 3781 tggaaaagaa agtggtaggg gctggagaga tggctcagtg gttaagagtg ccaactgctc 3841 ttctgaaggt cctgagttca aatcccagca accacagggt ggctcacaac ctcccgtaat 3901 gagacctgac accctcttct ggtgcatctg aagacaagta cattgtactt agatatagta 3961 gataaatctt ttgaccagag tgtgcagaaa gtcttgaatt caaattccca ggagccacat 4021 gatggctcac aaccatcact acagctctaa tgtactcata tacataaaat aaatcttaaa 4081 aaagtaatag aatgtgacat ggttctcatt gctgggaggg ataactttaa agcaagtaag 4141 atattcattg tagaatgtag gatacagcat aaaatatttg aaattaaaaa tcagtctaca 4201 acaataacca ttgtaggata tgtgtataat tcaaatttta cagcttgtat cttttttact 4261 acatgccata gacttcaatt atattaaaat ttctttatag gtaagtttaa gagtagtgtg 4321 atagaatatg aggttttgct atcataatgc ttttaacttg ttttcttagg tgtgaagaag 4381 acacctgaat catgggtgac attaaaaatt ttctgtatgc ctggtgtggc aaaaggaaga 4441 tgactccagc ctatgaaatt agagcagtag gaaacaaaaa cagacagaaa ttcatgtgtg 4501 aggtacataa agaatacagt taatttatat acttgtgaag ttcgtctggt ttaaaggaat 4561 gttttatttg gaaaggctga actgttgcag gttgtagaag aatttatttt gacttggctg 4621 gttttattat tttcaaagaa acattatctt gcaatacttg gctagggaaa ttattctaat 4681 gcttaaaaaa cttccttggt gctagtaagt cagaagataa aatgtttgca attttacatt 4741 tggggggtgg gtgtggttag agccttagtt aaggcatgca ccaccacccc tgggttctct 4801 gtttagagaa gcaaagtatt taaaagaaag gtagtgtttt cccttagtta ttataaagtt 4861 attattaaat tgcatggttg ggtgtgcaca gaagcatgtg aaaatcagga cagtttgtgg 4921 gacttagttt ctcttgctct accagtctag gggattcaat tccagttcat caatttggag 4981 gcaaagtgct cttgcttagt ccacttgctg tcttgtttcc ccctaaaccc cacagagttc 5041 agtggtggtg gtttaaggcc agccatttga taggcaagta ctgtccacag agcttagtta 5101 gatacccaat ctgaaaaaat ttaagtgtgg aaacctgagc cgcttaaatt gatactgttg 5161 aaccagtatg tcaatgaaca attcagctcc acggttttag ttaaataatc catgtgttgc 5221 ttgggtatgt taaaggaata tttacttatg tagtgtgtct aaaacagttg tattttgcct 5281 ttaattggcc atttattttt ttaaatccta gaattaccca gctttaattc aacttttttt 5341 ccccccttga atcttaaagg ttcgagtaga agggtttaat tatgctggta tgggcaattc 5401 caccaataaa aaggatgcac agagcaatgc tgccagagac tttgttaact atttggttcg 5461 aataaatgaa gtaaagagtg aagaagttcc agctgttggg gtaagtattt atgaccaaga 5521 acttgatatt tttgtttgct ttcccctttc tacccttggg ttcaagttaa cagatttaca 5581 ggatgtgtct acaaatacac tgtgtgcagg ggcattatat gaaaggatat agtggctata 5641 caaaaatgca ttgagtttta gagacacagt tgagattttt ttctacctga aatgtgcaga 5701 aagaaaccat accttgtgaa atttgtcctt tcctaaggct accaataagc actaaaaaca 5761 cagccattca gacatgcccc caaagagtat gaacagacag catttaaagt atattgtatt 5821 actaagccat gatgctcaga agtacaagaa attaattttt actcaaaaaa taaaaatttt 5881 caaattatgt gtttcattgg ggttaaagat gtgtgttcta aattctaata atgttgggag 5941 ggggggataa tctgggcttg atggtacagg cctgtggtct tagcaatatg gcaaattgag 6001 gccaattagg ctattgtatg acatcttacc ttaaaaatag caaattaacc agaagtgttg 6061 ggacattacc tttttttttt taagatttat ttatttatta tatgtaagta cactgcagtt 6121 gtcttcagac actccagaag agggcgtaag atcttgttac agatggttgt gagccaccat 6181 gtggttgctg ggatttggaa gagcagtcgg gtgctcttac ccgctgagcc atctaaccag 6241 tccgggacat tacctattac tattgtcgtt taagctctca attgacttgg acagtgtaca 6301 gtaaaaggga aagaaacatg tataattaac tgtaataaca tttagagatt tcaacacatg 6361 gctctaaatg aaattataaa ttgcctttat taatggttaa ctcatgtatt ctcaggactt 6421 agacccagaa atttgggcaa tcctgatact atcgatcatg ctgtttaaaa atggattttt 6481 caaaggaaca ggcatttatt cactataaca ttaaatactt tatacttctg tacaagataa 6541 ctcttgctta tttatctttg agacaagatc tcactttata ggccatagct ctaactatcc 6601 tggaacacat gtagacgagc ctgcctctgc ttcctgtagt ggttttggtt ttttggtttt 6661 tttggtttgg tttggttttt gttttttcaa gacggtttct ctgtgtggcc ctggctgtcc 6721 tggaacttgg atttgtagac cagactggcc tctaactcag aaatccgcct gcctccgcct 6781 cccgagtgct gggattaaag gcgtgcgcca ccaccgcccg gttcattcct aagttacttg 6841 aaactttgtc ttcaaacaaa ggcagaaatg ggaaaaatac tatggggaag gatgtttaat 6901 atatgggtat ctttgagtag tcttgagtct tctagtttct gcaaaacaaa caaaaacccc 6961 aagtactgac acttgacttt tcctcttgta gattgtacca cccccaccca tacttagcga 7021 cacctctgat agcacagcaa gtgctgcaga agggttacca gcaccaatgg gaggaccact 7081 tcctcctcat ctggctctca aagcagaagg taagggactt gaatatatgt acttaatgga 7141 ggataacaca gtcatgcttg gtcacctcac cttgtcattt gtatagagaa atcaataaac 7201 atgtttatta ggtgatccca ttcaagcagc cactgtttta gggtttgttc tgtttaaaag 7261 atttaaattt atagctgttt tacctgcaat acttatgggc caccaagtgg gttaaagaat 7321 tttatgagtt gccttttata tggctgtgta tcaggcttag agggctttgc acatattaga 7381 tactctgtgg ctgaattttg tattacatcc accttttgtt ttgccctacc tgtatacctg 7441 taataggatt tgtggattct agtcctgctg aaaattttat ttgggttatt aagagcagag 7501 taagattttg accaggtttc taacaaatac tgaaacacaa tttacagcat ctatcctatt 7561 gttttgactt gaacaaatta taaaactata tactaatctg tcactttaga gttcatgcat 7621 attgatgttt gcctgcagta cctgcggagg ccacaagagg ccaccactcc acaactggag 7681 ttaaacctga gccttcatgg gtactgcata tcaaacataa gtcttgtaag agaaaccagt 7741 gctctttatc tgctgaacca tctcttttgc atcccactct ggttttatat agagtcaaaa 7801 cttttagggg ctactaatta ttagtcctgg ggttagcttt cttttcagaa ttaggttttg 7861 tgtttctgtt tttatttagg ctgtaatttg gagaatgaat ttacactttc agattctcct 7921 gtttctactt tcccaaagct gggcttcagg cttgtttacc acacccagtg ttattctgtg 7981 gtgagggttg aacccattgc ttgcttggtg ctttgtagac atcctagcat tgtattaaac 8041 aaacttcatt ttcagcatct ctaaatgttt tacttaaaaa gatgtattgc ttttgggcca 8101 accacggtgg catactcacc tttaatccca gcacttactt gggaggcaga ggcaaataga 8161 tcctcatgag ttcagaggtg ttctggtcta cataccaagt tttggtacag ccaaagctaa 8221 ataatagact gacctcccct gtgtgcttac atattgtatt tgaggacccc cccctttttt 8281 taatagcaca agtgtataga agacaggaca aaatacattc agcatccaat atagactcag 8341 attattaggt tcataccttt accagctaga catttcctag tctggatagt tttgtgcttt 8401 gttatttatg tataaaaaca actgaaataa gtatgtctta aagtacacat tagggggctg 8461 gagcgatggc tcagcagtta agaacgctga ctgctcttcc agagaggtcc tgccttcaat 8521 tcccagcaat agcatggtgg ctcatgacca tctgtaatgg gatctgatgc ccttttctgg 8581 tgtgtctgaa gacagctaca gtgtactcat gtacataaat aaagtttaaa aaaagtacag 8641 attagtgctt aggagaaact caaccaagta tgagtacttg tgttctgtac cccaccagca 8701 tccatattgt gtagacagat ggttctgtgg gaaagttggc ctgctaggta cctaaatatg 8761 ctagcccagt gaaaagctgg tcaaatgaga aagggtttat ttattctgct ttatagtcca 8821 tgacaagatt gaaagtggca aaagcgtgga cagctgatca cctggcagag agcagggaat 8881 ttgtgctgtt aattgttagt tttctatttt cattatccaa gcaatgggac acttacagtg 8941 tcttatcttc tctcattaac caagacaatc tctaacagac catactacct tgggattaag 9001 agtaaagttg cagttaacat taattatcag actaaactac ttgactgctt cctggaggtt 9061 acactatggc ttccacatgc atagacatag acaaccataa ataaataggc tgaccaatac 9121 agtcctgatt atttcagatg tccttgcaga ttattgaaaa cctgtataca aacatgtagt 9181 cagggacatt tgttaaaata tgtagctttc ttcccccaaa cttggttagt taaaagagca 9241 attttctttt tttaatagca gaaaataatt ctggggttga gtcttctggc tatggcgctc 9301 ctggacctac ttgggaccga ggagccaacc ttaaagatta ctactcaaga aaggaagaac 9361 aagaagtaca agcggtgagg aatcttacat agtgttaatt tacatttttg aacatgcgac 9421 ttgggattta tttcacagca gagttgagta cctatacaag ttaatagcac attgagttgt 9481 tgatttgttt gttttgagac agtcttcaat cccaggctgg ccttcattcc agtggcccta 9541 gctagaaagc ctattttact agttggttgc ataaccctgg tgtacatgct tgtagtcgca 9601 gnattaaaga gagggtcagg agaatgacta gttcaaggcc aaggtggatt atagtgttct 9661 aagaacatag tgatatccag tctcaaaaac aggctcaggc tggagagatg gctcagtggt 9721 taagagcact gactgctctt ccagagttcc tgagttcaaa tcccagcaac cacatggtgg 9781 ctcacaacca tccgtaatga gatctgacgc tctcttctgg tgtgtctgaa gacagctaca 9841 gtgatcttat gtataataat attagtttaa caaaaaaaca gactcagtga taaagtggtt 9901 gactagccat gttcaaaccc ctggatctca gcactacaaa aataaaaatc tgactttata 9961 ttgaaaaaaa aaaacccaaa ctgtacatta ttattgtacc ttatgtaagt gtagtgtagt 10021 agtgcagcca aatttactat cattgattct acag //