Gene Networks Database


Strongylocentrotus purpuratus Genes in Development: Cell-type specific genes


Spec2d


Function

Spec2d is the aboral ectoderm specific gene.
It codes for a calcium-binding protein from the troponin C superfamily (Xiang et al., 1988).
The function of this protein is unknown, its accumulation in the aboral ectoderm cells marks a commitment to a pathway of histospecific differentiation in the embryo (Gan et al., 1993).

Protein

Spec2d is a calcium-binding proteins with the molecular mass of 14,000-17,000 Da (Xiang et al., 1988).
SWISS_PROT: P15844

Subcellular location


Expression Pattern

The Spec2d mRNAs accumulate mostly during the gastrula and pluteus stages of development. This mRNAs is restricted to the aboral ectoderm cells and their precursors (Hardin P.E. et al., 1988).

mRNA level

Temporal accumulation*

Method: RNA blot hybridization
Reference: Hardin et al., 1988

Stage
Egg
Cleavage
Hatching blastula
Midgastrula
Pluteus
Level
-
-
-
+
+
* Spec2d probe is specific for Spec2d and one or two other very closely related rare mRNAs.
Spec2d transcripts are rarer than other Spec transcripts. Spec2d mRNAs are first detectable at the gastrula stage and continue to accumulate through the pluteus stage.

Spatial localization*

Method: in situ hybridization
Reference: Hardin et al., 1988

Stage
18 hr hatching blastula
22 hr mesenchyme blastula
44 hr late gastrula
60 hr prism/pluteus
75 hr pluteus
Tissue
-
-
AE
AE
AE
* Spec2d probe is specific for Spec2d and one or two other very closely related rare mRNAs.


Sequences

GenBank:

Regulatory Regions

Regions

Regulatory Connections

Upstream Genes

Spec2d

Downstream Genes


Evolutionary Homologues


Links


Bibliography


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