LOCUS SPCDC17 4176 bp DNA PLN 10-APR-1993

DEFINITION Yeast (S. pombe) CDC17 gene for DNA ligase (EC 6.5.1.1).

ACCESSION X05107 NID g4924 KEYWORDS CDC17 gene; DNA ligase.

SOURCE fission yeast.

ORGANISM Schizosaccharomyces pombe Eukaryota; Fungi; Ascomycota; Archiascomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces.

REFERENCE 1 (bases 1 to 4176) AUTHORS Barker,D.G., White,J.H. and Johnston,L.H. TITLE Molecular characterisation of the DNA ligase gene, CDC17, from the fission yeast Schizosaccharomyces pombe JOURNAL Eur. J. Biochem. 162 (3), 659-667 (1987) MEDLINE 87161837 COMMENT Data kindly reviewed (04-NOV-1987) by BARKER D.G. FEATURES Location/Qualifiers source 1..4176 /organism="Schizosaccharomyces pombe" /db_xref="taxon:4896" TATA_signal 502..507 misc_feature 630..849 /note="ARS (autonomous replicating sequence)" TATA_signal 1086..1091 misc_feature 1167 /note="minor transcription initiation site" exon 1206..1305 /number=1 misc_feature 1206 /note="major transcription initiation site" CDS join(1223..1305,1346..1853,1916..3631) /codon_start=1 /product="DNA ligase" /db_xref="PID:g4925" /db_xref="SWISS-PROT:P12000"

translation="MRTVFSQIPRFKQVNQYIRMSTRQSDISNFFISSASHKSEHVEV SQSSSDSKNVDGRSTSEKRKVESVKLVDESKHNNHDDTGTQNVERENNIVSEAKKQKT LGSSSSSSDAVSSNNDSGASTPIPLPIKEPPLESNARNDKLKGHATFAEMVKAFTKIE NTSKRLEIIDIMGTYFFGILRDHPSDLLACVYLSINKLGPDYSGLELGIGESIIMKAI GESTGQTLQQIKLSFHKVGDLGLVAQTSRQNQPTMFKPAALTIPFLFDSLKKIAQMSG NQSQNRKIGVIKRLLSSCEGAEPKYLIRALEGKLRLQLAEKTILVALANATAQYHADK NGEKLSQQDRIEGEQILRDVYCQLPSYDLIVPHLIEHGLGTLRETCKLTPGIPTKPML AKPTKQISEVLNTFDQAAFTCEYKYDGERAQVHFTEDGKFYVFSRNSENMSVRYPDIS VSVSKWKKPDARSFILDCEAVGWDRDENKILPFQKLATRKRKDVKIGDIKVRACLFAF DILYLNGQPLLETPLNERRKLLYSMFQPSTGDFTFAKHSDQKSIESIEEFLEESVKDS CEGLMVKMLEGPDSHYEPSKRSRHWLKVKKDYLSGVGDSLDLIVIGAYYGKGKRTSVY GAFLLGCYDPDTETVQSICKLGTGFSEEHLETFYNQLKDIVISKKKDFYAHSDVPAHQ PDVWFEPKYLWEVLAADLSLSPVYKAAIGYVQEDKGISLRFPRFIRIREDKSWEDATT SEQVSEFYRSQVAYSQKEKEGSPAAEDY"

misc_feature 1280..1282 /note="alternative start codon" intron 1306..1345 /number=1 exon 1346..1853 /number=2 intron 1854..1915 /number=2 exon 1916..>3631 /number=3 polyA_signal 3670..3675 polyA_signal 3834..3839 polyA_site 3851..3855 polyA_site 3895..3896 BASE COUNT 1388 a 732 c 762 g 1294 t ORIGIN 1 aagcttccaa tgacggagaa agaaattgcc atttgaagag ccagagctgg tagattgaaa 61 acgtacagag gagcgcttta aaccctgagc gacaccgcga aacaaagatc gttgatacat 121 tttagtattt ttaatagaat tcggcttaaa taaaaaattt tcaaaacgaa attgaaaaaa 181 atatgaatga taaaataata aaatgaagtt ttataatagt ttatgcttaa tatatttaaa 241 caccagtttt tttccaaaca caacaaaccc aagaaaaaat aaacagaacc aaaaaataaa 301 aatatggatt taaggatcag aacagaatcg tcaatccgtt tctttatcca cctagagaca 361 agaagtgtta atttatataa aatggagaac ttggttctaa taagatttca acgaaaacaa 421 agatttcaga accgaaaaaa tttctccaag tgctagcaga ggtatattct ctgagaaaga 481 acaaaaatca aaaattgaat gtttatattg aatgttacct gtaacaggta acatgttttt 541 ttagtaatgc cgggctgtcg aaatttgact atgagttttg taaataaagc gatggttata 601 aacaatttta tgatagtttt tgctttcgaa ttaacatttc ataaaaaatt tgaaaaagaa 661 aaattttaaa aatttaagga caaaatccac ttgaaaaaca agtgcgaaca gctttttgca 721 aaaaaactac aaaccactac acattagcga ataagcctat taggaattta ttttaatttt 781 tgttgattta aatttctttt ttttttaaat ggttagaatc tagttgataa acttctagca 841 atgtatttcc aaattgtttc tattacgttc gttgatacag gcaattgttc atttctggta 901 tgactaaagc atttctatac aattcaactt ctcatttttt ctagctgtat ttatgatgta 961 cagagcgttg ggagagagtt gattaagtca atagtattta tgaatgagac aaggaacact 1021 catactatat caatgataaa tagcttttat attatcctgt tataatcata aaaattaatt 1081 tcatctatat agacttagaa aaaaatggtt tcgttttcac tgtccttaaa ctacaaatat 1141 cgtacacgtg ttacttgttc ttcaggtgta ccctcactat tgtcaaatct tatgaaattc 1201 tttactcgtt gacttgattg ttatgcgaac agtattttcg caaattcctc gttttaaaca 1261 agtcaatcag tacatacgga tgtcgacaag gcagtcagac attaggtttg ttagatagaa 1321 gacagacgtt gactaaccca tatagcaact tcttcatttc ttctgcttcg cacaaaagcg 1381 agcacgtgga ggtttctcaa tcgtcttctg attccaaaaa tgttgatggg agaagcacaa 1441 gcgaaaagag aaaggtcgaa tcagtgaaat tagtcgacga gtcgaaacac aacaaccacg 1501 acgacactgg aactcaaaat gttgagcgtg aaaataatat tgtgtctgag gcaaaaaagc 1561 aaaagacttt aggttcatcc tcctcttctt cagatgccgt atctagtaac aacgattctg 1621 gggcatctac tccaatacct ttgccaatca aagaaccacc gttagagtcc aatgctcgca 1681 atgataagtt aaaaggtcat gcaacatttg ctgaaatggt aaaagcattc acaaaaatag 1741 agaatactag caaacggttg gaaatcattg atataatggg gacttacttt tttggaattc 1801 ttcgcgacca tcccagcgat ttactggcct gtgtgtattt aagtatcaat aaggtatgaa 1861 cgtttggttt taaaggattt ctccttctca gtactaacgt ctttttttac attagttggg 1921 cccagattac tcgggactag agctaggaat tggcgaaagc attataatga aggctattgg 1981 agagtctaca gggcaaacgc ttcaacagat taaactatcg tttcacaaag ttggtgatct 2041 tggtcttgta gctcaaacat cccgtcaaaa tcaacccact atgtttaaac ctgcagcgct 2101 gacaattcca tttttatttg actcattaaa aaaaattgct caaatgagcg gaaaccaatc 2161 ccaaaataga aaaattggag tgatcaagcg gctattgagt tcctgtgaag gtgcagaacc 2221 taaatatttg attcgagctt tggaaggcaa gctacgcctc caacttgccg aaaaaaccat 2281 tttagtagca ttagcaaatg ccaccgctca atatcatgct gataagaatg gagaaaaact 2341 ttcgcaacaa gacaggattg aaggagagca gattcttcga gatgtttact gtcaactgcc 2401 ttcatacgac cttatcgttc ctcacttgat tgagcatgga cttggtactt tgcgtgaaac 2461 ttgtaaatta acacctggaa tcccaacaaa acccatgctg gctaagccga cgaaacaaat 2521 ttcagaagtt ttgaatacgt ttgatcaagc cgcatttaca tgtgaataca aatacgatgg 2581 cgagcgcgcc caagttcatt ttaccgaaga tgggaagttt tatgtatttt ctaggaattc 2641 tgaaaacatg tctgttcgct atccggacat ctctgtttct gtatcgaagt ggaaaaaacc 2701 agatgctcgt tcttttattc tcgattgcga agctgtcggt tgggaccgtg atgaaaacaa 2761 aattttacct tttcaaaaac ttgcaacaag aaagaggaaa gatgtgaaaa ttggggacat 2821 taaggtccga gcatgccttt tcgcttttga cattttatac ctaaatgggc aacctctttt 2881 ggaaacccca ctcaacgagc gtcgaaaact actttactca atgtttcaac caagtactgg 2941 agactttact tttgctaaac atagcgatca aaagtctatt gaatccattg aagaattcct 3001 tgaagaatct gtcaaagatt cttgtgaggg tttaatggtc aaaatgcttg aaggcccgga 3061 ttctcattat gaaccgtcaa aacgttccag gcattggcta aaagttaaaa aagactatct 3121 ttctggtgtt ggagattctc tggatttgat tgtaattggc gcatactacg gaaagggtaa 3181 acgtacttct gtttatggtg cctttctttt gggctgctac gatccagata ccgaaacagt 3241 tcaatcgatt tgcaaactcg ggactggttt ttcagaggag catttagaaa ctttttacaa 3301 tcaacttaaa gacattgtta tatctaaaaa gaaagatttt tatgctcata gcgatgtacc 3361 tgcgcatcag cctgacgtct ggtttgagcc taagtacttg tgggaagtct tagctgccga 3421 tttatctttg tctccggttt acaaagctgc aattggatat gttcaagagg acaaaggaat 3481 cagtttacgt tttccaagat tcattcgtat tcgggaagac aagagctggg aggatgctac 3541 aacaagtgaa caggtttcag aattctatcg ttcgcaggtg gcttacagtc aaaaggaaaa 3601 agaagggtcc ccagctgccg aagattatta agtttgtagc tgagagttac tgctgagagc 3661 tactgtcata ataaagggta atgttcggct aaaatttgcc caaagaggct aatatgaatt 3721 atgttaaaga gacagacaaa ttgagtttat gctctagctg atggctattt ctctagctta 3781 ctactattta tttttttcta attgtaatcc cctgtggcta aaaaaaaatt aataataaac 3841 aacattgaat ttccaaatta taacattaga ttgaaaattt gaatcttatt tatccctttt 3901 tattatcctt tttatatgat tttatacatt gtattaccat tttacgttcg taccaagcct 3961 tactctattt tgccgtcata ttcctcctta cagtggatta cgaatgcttg gtgttcatta 4021 ccgtccatat acattttatg tcactgtagc aaacaccaag aagaaattac aatattggct 4081 ttaaagccat taattgctat gaataattca gaagaatggc cattgaaaca tgtgcaaccg 4141 cccaaattgt catttcgtca tttgctatcg agatct //
 

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