[ Fold Library: v.1.53.6353 ] [ Sequence Database: v.2001.10.27 ] [ 3D-PSSM Binary: v.2.2 ] [ Server Version: v.2.6.0 ]
Results for ydr466w__

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Please Cite: Enhanced Genome Annotation using Structural Profiles in the Program 3D-PSSM.
Kelley LA, MacCallum RM & Sternberg MJE (2000). J. Mol. Biol. 299(2), 499-520.

Sidechains, where applicable, have been modelled by SCWRL

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Job Submitted on Fri Nov 9 19:25:50 GMT 2001


Description: ydr466w__
Remote Host:
Remote Address: 65.81.203.223
E-mail Address: pelowry@davidson.edu
Input Format: single
Query Length: 790
Global Local: yes
Low-complexity Filter: yes
PROSITE motifs
PS00107 Protein kinases ATP-binding region signature
PS00108 Serine/Threonine protein kinases active-site signature

Query Functional Keywords Weight
Phorbol-ester binding 57
Serine/threonine-protein kinase 49
cAMP 46
Duplication 41
ATP-binding 39
Transferase 38
Zinc 37
Phosphorylation 33
Calcium-binding 32
Alternative splicing 25

E-value Key (% Certainty)
  95%     90%     80%     70%     50%  

View Alignment SCOP Template Lengths Model PSSM E_value PSSM Type SAWTED E-value Biotext Class Fold SuperFamily Family Protein Species ID Region CS
View Alignment c1fota_ 30%i.d. 299 View Model or Shift-Click to Save Coordinates
With Sidechains
0.0137 R1D 0.248
serthr,SERINETHREONINE,activated,kinases,KINASE  *
n/a Alpha and beta proteins (a+b) Protein kinase-like (PK-like) Protein kinase-like (PK-like) homol. to d1apme_ - - 1fot a 0.000
View Alignment d1apme_ 27%i.d. 341 View Model or Shift-Click to Save Coordinates
With Sidechains
0.0583 R1D 0.255
serthr,SERINETHREONINE,activated,kinases,KINASE
0.91 cAMP,
Phorbol-ester binding,
Repeat,
Calcium-binding,
Serine/threonine-protein kinase,
Multigene family,
ATP-binding,
Phosphorylation,
Zinc,
Alternative splicing,
Duplication,
Transferase,
Alpha and beta proteins (a+b) Protein kinase-like (PK-like) Protein kinase-like (PK-like) Serine/threonin kinases cAMP-dependent PK, catalytic subunit Mouse (Mus musculus) 1apm e: 0.000
View Alignment d1phk__ 27%i.d. 277 View Model or Shift-Click to Save Coordinates 0.724 R1D 0.432
serthr,serine,SERINETHREONINE,kinases,kinase
0.66 Repeat,
cAMP,
Phosphorylation,
Calcium-binding,
Alternative splicing,
Serine/threonine-protein kinase,
Multigene family,
ATP-binding,
Transferase,
Alpha and beta proteins (a+b) Protein kinase-like (PK-like) Protein kinase-like (PK-like) Serine/threonin kinases gamma-subunit of glycogen phosphorylase kinase (Phk) Rabbit (Oryctolagus cuniculus) 1phk - 0.659
View Alignment d1a06__ 30%i.d. 279 View Model or Shift-Click to Save Coordinates 0.874 R1D 0.278
phosphorylates,serthr,SERINETHREONINE,activated,kinases
0.63 Repeat,
cAMP,
Calcium-binding,
Serine/threonine-protein kinase,
Multigene family,
ATP-binding,
Phosphorylation,
Alternative splicing,
Transferase,
Alpha and beta proteins (a+b) Protein kinase-like (PK-like) Protein kinase-like (PK-like) Serine/threonin kinases Calmodulin-dependent protein kinase Rat (Rattus norvegicus) 1a06 - 0.488
View Alignment c1koa__ 19%i.d. 447 View Model or Shift-Click to Save Coordinates 1.03 1D 0.334
c2,phosphorylates,serthr,serine,SERINETHREONINE
0.55 Repeat,
Calcium-binding,
Serine/threonine-protein kinase,
Multigene family,
ATP-binding,
Phosphorylation,
Alternative splicing,
Transferase,
not in SCOP 1.53 3D-PSSM pseudo-family founder id c1koa__ - - - 1koa - 0.000
View Alignment d1koba_ 22%i.d. 353 View Model or Shift-Click to Save Coordinates 1.27 1D 0.334
c2,phosphorylates,serthr,serine,SERINETHREONINE
0.60 Repeat,
cAMP,
Cell division,
Calcium-binding,
Serine/threonine-protein kinase,
Multigene family,
ATP-binding,
Phosphorylation,
Alternative splicing,
Transferase,
Alpha and beta proteins (a+b) Protein kinase-like (PK-like) Protein kinase-like (PK-like) Serine/threonin kinases Twitchin, kinase domain California sea hare (Aplysia californica), twk43 1kob a: 0.488
View Alignment d1tkia_ 22%i.d. 321 View Model or Shift-Click to Save Coordinates 1.39 1D 0.275
c2,phosphorylates,serthr,serine,SERINETHREONINE
0.65 Repeat,
cAMP,
Calcium-binding,
Serine/threonine-protein kinase,
Multigene family,
ATP-binding,
Phosphorylation,
Alternative splicing,
Transferase,
Alpha and beta proteins (a+b) Protein kinase-like (PK-like) Protein kinase-like (PK-like) Serine/threonin kinases Titin, kinase domain Human (Homo sapiens) 1tki a: 0.488
View Alignment d1koa_2 23%i.d. 350 View Model or Shift-Click to Save Coordinates 1.47 1D 0.275
c2,phosphorylates,serthr,serine,SERINETHREONINE
0.58 Repeat,
Calcium-binding,
Serine/threonine-protein kinase,
Multigene family,
ATP-binding,
Phosphorylation,
Alternative splicing,
Transferase,
Alpha and beta proteins (a+b) Protein kinase-like (PK-like) Protein kinase-like (PK-like) Serine/threonin kinases Twitchin, kinase domain Caenorhabditis elegans, pjk4 1koa 5915-6264 0.488
View Alignment c1ia8a_ 25%i.d. 272 View Model or Shift-Click to Save Coordinates 1.49 1D 0.458
phosphorylates,serthr,SERINETHREONINE,activation,kinases
0.58 Repeat,
Cell division,
Calcium-binding,
Serine/threonine-protein kinase,
Multigene family,
ATP-binding,
Phosphorylation,
Alternative splicing,
Transferase,
Alpha and beta proteins (a+b) Protein kinase-like (PK-like) Protein kinase-like (PK-like) homol. to d1apme_ - - 1ia8 a 0.000
View Alignment c1f3mc_ 22%i.d. 287 View Model or Shift-Click to Save Coordinates 1.61 1D 0.425
activated,serthr,SERINETHREONINE,kinase,kinases
0.64 cAMP,
Repeat,
Myristate,
Cell division,
Calcium-binding,
Serine/threonine-protein kinase,
Multigene family,
ATP-binding,
Phosphorylation,
Alternative splicing,
Transferase,
Alpha and beta proteins (a+b) Protein kinase-like (PK-like) Protein kinase-like (PK-like) homol. to d1jnk__ - - 1f3m c 0.000
View Alignment d1hcl__ 26%i.d. 294 View Model or Shift-Click to Save Coordinates 1.9 R1D 0.511
serthr,SERINETHREONINE,kinases,KINASE,enzyme
0.48 Phosphorylation,
Cell division,
Alternative splicing,
Serine/threonine-protein kinase,
Multigene family,
ATP-binding,
Transferase,
Alpha and beta proteins (a+b) Protein kinase-like (PK-like) Protein kinase-like (PK-like) Serine/threonin kinases Cyclin-dependent PK (different isozymes) Human (Homo sapiens) 1hcl - 0.988
View Alignment d1blxa_ 23%i.d. 305 View Model or Shift-Click to Save Coordinates 2.31 R1D 0.38
serthr,SERINETHREONINE,kinases,KINASE,ATP-BINDING
0.49 Phosphorylation,
Cell division,
Alternative splicing,
Serine/threonine-protein kinase,
Multigene family,
ATP-binding,
Transferase,
Alpha and beta proteins (a+b) Protein kinase-like (PK-like) Protein kinase-like (PK-like) Serine/threonin kinases Cyclin-dependent PK (different isozymes) Mouse (Mus musculus) 1blx a: 0.488
View Alignment d1csn__ 18%i.d. 293 View Model or Shift-Click to Save Coordinates 2.42 1D 0.336
serthr,SERINETHREONINE,kinases,kinase,KINASE
0.69 cAMP,
Repeat,
Myristate,
Cell division,
Calcium-binding,
Serine/threonine-protein kinase,
Multigene family,
ATP-binding,
Phosphorylation,
Alternative splicing,
Transferase,
Alpha and beta proteins (a+b) Protein kinase-like (PK-like) Protein kinase-like (PK-like) Serine/threonin kinases Casein kinase-1, CK1 Schizosaccharomyces pombe 1csn - 0.659
View Alignment d1p38__ 23%i.d. 351 View Model or Shift-Click to Save Coordinates 2.65 1D 0.381
phosphorylates,activated,serthr,SERINETHREONINE,kinase
0.49 Phosphorylation,
Cell division,
Alternative splicing,
Serine/threonine-protein kinase,
Multigene family,
ATP-binding,
Transferase,
Alpha and beta proteins (a+b) Protein kinase-like (PK-like) Protein kinase-like (PK-like) Serine/threonin kinases MAP kinase p38 Mouse (Mus musculus) 1p38 - 0.488
View Alignment d1ckia_ 21%i.d. 292 View Model or Shift-Click to Save Coordinates 2.74 1D 0.375
serthr,SERINETHREONINE,kinases,activation,kinase
0.60 cAMP,
Myristate,
Calcium-binding,
Serine/threonine-protein kinase,
Multigene family,
ATP-binding,
Phosphorylation,
Alternative splicing,
Transferase,
Alpha and beta proteins (a+b) Protein kinase-like (PK-like) Protein kinase-like (PK-like) Serine/threonin kinases Casein kinase-1, CK1 Rat (Rattus norvegicus) 1cki a: 0.659
View Alignment d1pme__ 24%i.d. 333 View Model or Shift-Click to Save Coordinates 3.18 1D 0.357
phosphorylates,serthr,SERINETHREONINE,activated,kinases
0.49 Phosphorylation,
Cell division,
Alternative splicing,
Serine/threonine-protein kinase,
Multigene family,
ATP-binding,
Transferase,
Alpha and beta proteins (a+b) Protein kinase-like (PK-like) Protein kinase-like (PK-like) Serine/threonin kinases MAP kinase Erk2 Human (Homo sapiens) 1pme - 0.488
View Alignment d1cm8a_ 23%i.d. 327 View Model or Shift-Click to Save Coordinates 3.59 1D 0.331
phosphorylates,serthr,SERINETHREONINE,activated,kinases
n/a Alpha and beta proteins (a+b) Protein kinase-like (PK-like) Protein kinase-like (PK-like) Serine/threonin kinases MAP kinase p38-gamma Human (Homo sapiens) 1cm8 a: 0.976
View Alignment d1a6o__ 22%i.d. 327 View Model or Shift-Click to Save Coordinates 3.71 1D 0.537
SERINETHREONINE,kinases,KINASE,ATP-BINDING,TRANSFERASE
0.50 Phosphorylation,
Cell division,
Alternative splicing,
Serine/threonine-protein kinase,
Multigene family,
ATP-binding,
Transferase,
Alpha and beta proteins (a+b) Protein kinase-like (PK-like) Protein kinase-like (PK-like) Serine/threonin kinases Protein kiase CK2, alpha subunit Maize (Zea mays) 1a6o - 0.988
View Alignment d1jnk__ 21%i.d. 346 View Model or Shift-Click to Save Coordinates 3.95 1D 0.408
phosphorylates,nervous,serthr,SERINETHREONINE,activated
0.49 Phosphorylation,
Cell division,
Alternative splicing,
Serine/threonine-protein kinase,
Multigene family,
ATP-binding,
Transferase,
Alpha and beta proteins (a+b) Protein kinase-like (PK-like) Protein kinase-like (PK-like) Serine/threonin kinases c-jun N-terminal kinase (jnk3s) Human (Homo sapiens) 1jnk - 0.488
View Alignment c1howa_ 19%i.d. 346 View Model or Shift-Click to Save Coordinates 4.19 1D 0.339
serthr,SERINETHREONINE,kinases,KINASE,ATP-BINDING
0.49 Phosphorylation,
Cell division,
Alternative splicing,
Serine/threonine-protein kinase,
Multigene family,
ATP-binding,
Transferase,
Alpha and beta proteins (a+b) Protein kinase-like (PK-like) Protein kinase-like (PK-like) homol. to d1jnk__ - - 1how a 0.000