LOCUS PALCOL1A 2193 bp mRNA INV 15-MAR-1990
DEFINITION P.lividus alpha COLL1-alpha mRNA, 3' end.
ACCESSION M25282
NID g159957
KEYWORDS collagen.
SOURCE P.lividus, cDNA to mRNA.
ORGANISM Paracentrotus lividus
Eukaryotae; mitochondrial eukaryotes; Metazoa; Echinodermata;
Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida;
Echinidae; Paracentrotus.
REFERENCE 1 (bases 1 to 2193)
AUTHORS D'Alessio,M., Ramirez,F., Suzuki,H.R., Solursh,M. and Gambino,R.
TITLE Structure and developmental expression of a sea urchin fibrillar
collagen gene
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 86, 9303-9307 (1989)
MEDLINE 90083256
COMMENT Draft entry and computer-readable sequence for [1] kindly provided
by F.Ramirez, 07-JUN-1989.
FEATURES Location/Qualifiers
source 1..2193
/organism="Paracentrotus lividus"
/db_xref="taxon:7656"
mat_peptide <1..1512
/note="alpha collagen type 1"
CDS <1..2193
/note="alpha collagen type 1 precursor"
/codon_start=1
/db_xref="PID:g159958"
/translation="IGPPGNVGLQGPPGELGPSGPPGARGPPGQSGSPGPDGPAGAEG
DRGPVGPMGPSGPSGLQGERGDNGEPGPAGAPGQRGDPGDAGPQGSPGSPGFAGPPGR
PGNPGPQGELGPTGARGETGPPGPSGPTGDPGPQGPLGAPGAQGERGETGPQGQSGPP
GPLGSLGPPGAQGPPGPPGPSGNAGSPGQPGIRGEPGQTGPTGQPGLAGATGPPGDRG
DKGNDGQSGPAGPSGPPGPPGPSGILGLAGGIGPRGASGPPGAPGEPGSRGSHGKSGD
RGSPGAVGPPGNPGPAGENGQPGSDGNDGAPGAQGPRGEKGDTGASGANGSPGAPGPI
GAPGPAGASGPGGDTGSVGAPGPPGSTGAHGSTGPAGPAGPAGPAGERGETGPAGHKG
HTGVPGLPGLQGTPGPMGEPGAPGEQGQQGTRGLPGARGSNGNDGPAGPRGFDGPEGP
RGPRGESGGSGPPGPPGPPGPPGMPGQVQSSYGIRYPSFQSGGKGPSPYGYAYRDDSK
NDAVKIQDDELLASINSLSQQIEMIKTPQGKSQNNPARSCKDIFLNDANAESGTYWVD
PNLGCHQDAIQVHCEQETQATCVSPSMSQIINSTWYVGKVKRTYFSTMEGGDKFSYIE
EPTQMTFLRLLSTSARQTVTYYCKNVAGNPIFRSSSEIELVDDETSKFNYNIIEDGCS
TATSQKGKSVYEYETKKTTRLPIVDFAPGEVGLENQKFGLEMGPVCFS"
BASE COUNT 543 a 635 c 626 g 389 t
ORIGIN
1 attggacccc caggaaatgt tggacttcag ggacctcctg gagaacttgg accctcagga
61 cccccaggcg cacgtggacc accaggacaa agtggaagcc caggacctga tggacctgcc
121 ggagctgagg gagacagggg accagttgga cccatgggac ccagcggacc ttctggactt
181 cagggagaga ggggagacaa tggcgaacct ggacccgctg gagcacctgg acaacgtgga
241 gaccctggag atgctggacc acagggatca cctggatcac ccggatttgc tggaccacct
301 ggccgccctg gaaacccagg accacaagga gagcttggac ctactggagc tcgtggagag
361 actggacccc caggaccatc tggacctact ggagaccccg gcccacaggg acctcttgga
421 gcaccaggag cacagggaga gcgtggagag actggacctc agggacaatc tggaccccca
481 ggaccccttg gaagccttgg gccacccgga gcacagggac cacctggacc tcccggaccc
541 tctggcaacg ctggtagccc cggacaacct ggtattcgtg gagagcctgg tcagactgga
601 cctactggac aacctggtct tgctggagcc actggacccc caggagatcg tggagataag
661 ggaaatgatg gacaatctgg acctgctgga ccttctggac ccccaggacc ccctggacca
721 tctggaatcc ttggacttgc tggaggaatt ggaccccgtg gagcctctgg accaccagga
781 gcacctggag aacctggaag ccgtggatca cacggaaagt ctggagatag aggaagcccc
841 ggagctgttg gaccacccgg aaaccctgga cccgctggag agaatggcca acctggtagc
901 gatggaaatg atggagcccc tggcgcccaa ggaccccgtg gagagaaggg agacactggt
961 gcctctggag ccaatggatc acctggagca cctggaccta ttggtgcccc cggacctgct
1021 ggtgcatctg gacctggtgg tgacactgga tctgttggtg ccccaggacc cccagggtct
1081 actggtgctc atggctctac tggtcctgct ggacctgctg gacccgctgg acctgctggc
1141 gagcgtggag aaactggacc tgctggacac aagggacaca ctggagttcc tggacttcct
1201 ggtcttcagg gaacccctgg acccatggga gagcctggtg cacccggaga acaaggacaa
1261 cagggaacca ggggattgcc cggtgcccgt ggatctaatg gaaacgatgg acccgcagga
1321 ccccgtggat ttgatggacc agaaggaccc cgtggacccc gtggagagag tggtggatct
1381 ggacccccag gacctcccgg acccccagga ccacctggta tgcccggcca agtccagtcc
1441 tcatacggaa tcagataccc atccttccaa tccggtggca agggaccttc tccttatggc
1501 tatgcttaca gagacgacag caagaatgat gccgtcaaga ttcaggatga tgagcttcta
1561 gcttcaatca actctcttag ccaacagatt gaaatgatca agactcctca gggcaagtct
1621 cagaacaacc ccgccaggtc atgcaaggat atcttcctta acgacgccaa cgcagagagt
1681 ggaacttact gggtggaccc caaccttgga tgtcatcaag atgctatcca ggtccattgt
1741 gaacaagaaa ctcaagccac ctgtgtatct ccatcaatga gccagatcat caacagcaca
1801 tggtacgtcg gcaaggtaaa gcgtacctac ttctccacaa tggaaggcgg agacaagttc
1861 tcatacattg aagaacctac ccagatgacc ttcctgcgtc tcctctccac cagcgcccgc
1921 caaaccgtca cttactactg caagaacgtt gcaggcaacc ccatcttccg ctctagctct
1981 gagatcgaac ttgtagatga tgaaaccagc aaattcaact acaatataat tgaggatggc
2041 tgctcgaccg caacatcaca gaaaggcaag tctgtctacg agtatgagac caagaagaca
2101 acgcgtcttc caatcgttga tttcgcccct ggtgaagttg gacttgaaaa ccaaaagttt
2161 ggcctggaga tgggacctgt gtgcttttca taa
//