Bio111: Molecules, Genes and Cells Syllabus Spring 2008
Professor Bernd
Sections C and D: MWF 11:30-12:20am   Chambers 1004

How to contact me
Dr. Bernd's office: Watson 289 x2889kabernd@davidson.edu

You can contact me electronically or in person. Try to head off mild confusion before it becomes paralyzing panic. Remember that we have three hours a week in lab. Incubation periods or early wrap up are times you should use to ask questions. Use the time wisely and stay on top of the material. If you find you are having trouble, contact me!

Required reading material
1)WWW readings appear as links from the Study Guide Heading Section of the BIO111 homepage (http://www.bio.davidson.edu/courses/Bio111/Bio111.html)
2) Additional animations are found on the website that accompanies our text (http://www.thelifewire.com , Choose edition 8 links)

From the bookstore:
3)Purves, Orians, Heller, and Sadava: Life the Science of Biology. 8th edition (Mandrill on cover)
4)Lom, B., Campbell, A.M., and Bernd, K. Study Guide, and Lab Manual Spring 2008 version

The four sources listed above all contain required reading. Be sure that you have access to each. The 6th and 7th editions of the text are still 'around'. They have different page numbers and less up to date content.

Schedules
Class readings and assignments. 2008 class schedule
Lab readings and assignments. 2008 lab schedule

Information about Bio 111: Molecules, Genes and Cells

Bio111 is designed to provide the background necessary to tackle the 'big questions' in biology. We will delve into what is currently known about the components of the cell, the methods used to study them, and the vocabulary used to talk about them. From those broad statements it should be obvious that we will be covering a large amount of information. This course provides background and helps you learn how to talk and think like biologists. It is an introduction to topics that are covered in upper level courses. To make this information more manageable the course provides information on a 'need-to-know' basis. Just as you would not read every history book to find out about a single English rebellion--we will not march through the textbook. Each unit provides unifying questions and the Study Guide, text, and study questions are designed to provide the background information necessary for the class to discuss the 'big question'.

There are two types of reading for this class.  Both types of readings include information from the text and from WWWeb sources. Overview Readings : skim through this quickly to get an idea of the overall topic and to provide background information. Focused Readings : readings that should be learned and thoroughly understood. Your Study Guide will serve to bring these readings together and will provide the basis for our class discussions. Study questions found in the Study Guide are to be prepared before class They will not be handed in but they will form the basis of our discussion so it is in your best interest to write out main points before class. We will discuss all of the topics and questions if you ask about them. The more you ask questions the more this class is tailored to you.

Assignments:
All assignments emphasize the fact that knowledge is not useful if you cannot convey what you have learned. Class participation, reviews, written summaries, and oral presentations require that you practice communication skills and apply and synthesize new information. Check the class and laboratory syllabus now for due dates and times and notice that they occur before 11:30am or outside of class meeting times. Plan ahead. The assignment dates will not change. Do not cut it so close that a printer problem costs you points. Plan to turn in an assignment with time to spare as late assignments are not an 'option' to be chosen and are penalized Subtract 5% for 1min late and an additional 5pts for every 60min after that.

You are responsible for all assigned reading, class material, and laboratory material. The 3 reviews, 2 quizzes and final exam will cover material assigned during that 'unit'. Like the questions in the Study Guide, the reviews will require synthesis and application of information. Samples of reviews I have given are available on my course homepage. I strongly encourage you to look at the 'spots' right now and work through the questions as we work through the unit.

All reviews are take-home, closed-book and to be completed by yourself under the honor code. I require answers to be typed and in the form of complete sentences.

Laboratory: Lab groups (of 4) will be set up during the first week of lab and will be maintained through the semester. You may not miss lab. Since you will be working in groups, labs cannot be 'made-up' during another lab period. It should go without saying that you will not schedule other activities during any lab hours. This is where you get to practice science by forming hypotheses and determining the best way to test the hypotheses' validity. Each of the four lab units first introduces the background and procedures that will be used, then requires that you design experiments to further you understanding of the topic and concludes with a report of your findings in oral or written form. The laboratory portion of the course grade will come from your work with your lab group (2%), your oral presentations (3 and 3%), and your writing assignments (3, 3, and 6%) for a total of 20% of your final grade.

Lab presentations and written reports involve working in groups. Be certain that you understand the rules and boundaries of group work and source citation. If you have any questiops ASK BEFORE HANDING ANYTHING IN since plagiarism is wrong and has severe consequences.  The Davidson College Biology Department’s statement on plagiarism is found at: http://www.bio.davidson.edu/dept/plagiarism.html and is the guide for this course. You are responsible for reading and following the guide. The course follows the citation style seen in the journal Cell. You must follow both the in text and bibliographic citation style described here http://www.cell.com/misc/page?page=authors . I suggest looking at a copy of the journal (library or BioCenter) to see the rules in practice.

Grading rubric for lab articles and presentations

Additional Resources: I am also available for additional helps, during scheduled lab times if labwork concludes early, by appointment, or by email message sent when the question occurs to you. Written and oral assignments require outside research and reading. There are thousands of resources available. To help you find the right resources I advise beginning early and remembering that we have great reference librarians in Little Library.

Your lab and classmates are a valuable resource. I strongly encourage study groups where members work together to determine explanations for study guide questions and discuss the reading and lab assignments. These groups work best if they meet regularly. Do not wait until the assignment looms.

Extra Credit Summaries This course has the breadth of an introductory course but it cannot cover every topic. To facilitate your exposure to more topics and current findings I offer extra credit for summaries of departmental seminars (Biology, Chemistry, Physics, Smith Lecture). To earn these points you must attend the seminar (most of which last approximately one hour) and within 72hours of the event you must a) email me a one to two paragraph summary relaying your impressions of the content and presentation of the seminar OR b) ask a question at the seminar and email the question to me. Any points earned will be added on to the score you earn on the next review/exam that directly follows the event. You may earn a maximum of 4 extra credit points during the semester. I encourage you to attend as many as you can.

Seminars will be announced in the BioCenter Newsletter. There are afternoon, evening, Thurs, Fri, Sun, and Mon opportunities. I encourage you to put them on your calenddar and attend as many as possible.

Accommodations for Students With Disabilities: I am happy to provide accommodations for students with learning or physical disabilities.  If you are a student with a learning disability documented by Davidson College please identify yourself to me within the first two weeks of class so that arrangements can be made. Students with other disabilities are encouraged to self-identify so that we may discuss if there is any way in which I can make accommodations that will enhance your learning experience.  All such discussions will be fully confidential unless you otherwise stipulate.

Course grade

3 Reviews (covering lab and lecture material)

18% ea

2 quizzes

2% ea

Laboratory grade

20%

Final Exam (in two parts)

19%

Participation

3%

B+ = 3.3 = 87-89
C+ = 2.3 = 77-79
D+ = 1.3 = 67-69
A =4.0 =94-100
B = 3.0 = 84-86
C = 2.0 = 74-76
D = 1.0 = 60-66
F = below 60
A- =3.7 = 90-93
B- = 2.7 = 80-83
C- = 1.7 = 70-73

Your course grade will be determined by converting your numerical score into a letter grade and adjusting the letter grade as much as 1/2 a grade level up or down based on your preparation for and participation in class questions and discussion (the participation grade). Remember, an 'A' for participation requires above average and consistent preparation and participation in class. (If you did not complete a written assignment you would expect to get a '0' on it. Not coming to class or coming to class unprepared and never speaking is equivalent to forgetting to complete this assignment and will be evaluated as such.)