This web page was produced as an assignment for an undergraduate course at Davidson College.


Troponin C Genbank Search Results

compiled by Aaron N. Rice


Troponin C (TnC) is part of the troponin protein complex (comprised of Troponins C, I, and T) which helps position tropomysin along the thin filament in muscle cells (Campbell, 1996) via calcium-dependent regulation (Vassylyev et al., 1998). This troponin complex is found in all muscle cells, though there are different isoforms of the proteins between different types of muscle cells (e.g., cardiac and skeletal muscle cells, see Homo sapiens and Xenopus laevis sequences). Specifically, it is TnC that binds to 2 calcium cations, while TnI binds to actin, and TnT binds to tropomysin (Voet and Voet, 1995).

 
Fig. 1. A cartoon of the Troponin complex within the muscle cell. Shown are the position of the Troponin proteins (T, I, C), in relation to actin, myosin and tropomysin. Adapted from Zot and Potter, 1987.

Here is a closeup image of chicken TnC which has been crystalized:

 
 Fig. 2. Chicken (Gallus gallus) TnC (MMDB Id: 5512 PDB Id: 1NCZ)

Table 1. Nucleotide sequences of TnC taken from different organisms (from NCBI).

 Organism

Nucleotide Sequence

Protein Sequence
Caenorhabditis elegans

 genomic DNA

Yes
Drosophilia silvestris

  cDNA

Yes
Gallus gallus

cardiac TnC cDNA

Yes
Homo sapiens

cardiac TnC cDNA

Yes
 Homo sapiens

skeletal TnC cDNA

Yes 
 Xenopus laevis

cardiac TnC cDNA

Yes
 Xenopus laevis

 skeletal TnC cDNA

Yes


References:

Campbell NA. 1997. Biology, 4th ed. Menlo Park, CA: Benjamin/Cummings Publishing Company.

National Center for Biotechnology Information. 2000 March 9. NCBI Home Page. <http://www.ncbi.nlm.nih.gov:80/>. Accessed 2000 March 19.

Vassylyev DG, Takeda S, Wakatsuki S, Maeda K, Maeda Y. 1998. Crystal structure of troponin C in complex with troponin I fragment at 2.3-A resolution. Proc. Nat. Sci. USA 95(9):4847-52.

Voet D, Voet JG. 1995. Biochemistry. New York, NY: J. Wiley and Sons, Inc.

Zot AS, Potter JD. 1987. Structural aspects of troponin-tropomyosin regulation of skeletal muscle contraction. Ann. Rev. Biophys. Biophys. Chem. 16: 535-559.


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©2000 Department of Biology, Davidson College, Davidson, NC 28036

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