LOCUS SPU18784 3285 bp mRNA INV 02-FEB-1996
DEFINITION Strongylocentrotus purpuratus transcription factor SpGCF1 mRNA,
complete cds.
ACCESSION U18784
NID g755247
KEYWORDS .
SOURCE purple urchin.
ORGANISM Strongylocentrotus purpuratus
Eukaryotae; mitochondrial eukaryotes; Metazoa; Echinodermata;
Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida;
Strongylocentrotidae; Strongylocentrotus.
REFERENCE 1 (bases 1 to 3285)
AUTHORS Zeller,R.W., Coffman,J.A., Harrington,M.G., Britten,R.J. and
Davidson,E.H.
TITLE SpGCF1, a sea urchin embryo DNA-binding protein, exists as five
nested variants encoded by a single mRNA
JOURNAL Dev. Biol. 169 (2), 713-727 (1995)
MEDLINE 95301110
REFERENCE 2 (bases 1 to 3285)
AUTHORS Zeller,R.W.
TITLE Direct Submission
JOURNAL Submitted (17-DEC-1994) Robert W. Zeller, University of California,
San Diego, Biology, 9500 Gilman Drive, La Jolla, CA 92093-0347, USA
FEATURES Location/Qualifiers
source 1..3285
/organism="Strongylocentrotus purpuratus"
/db_xref="taxon:7668"
/dev_stage="4 hr embryo"
CDS 108..1568
/codon_start=1
/function="transcription factor"
/product="SpGCF1"
/db_xref="PID:g755248"
/translation="MSTLPQPLSHCLLNQVHPALNLPQTGVITDIKPMISNKPPTQEV
KPNILATGLPYPPLNVPRLPVMPNVSLPSVSMPSVSMPNVSMPNASMPSVSMPNVSMP
SIPHHNLQGNLGQLLNNSNSQKMSQMKKCPNEFLHQNPQSERQLFYNDVAMQLYNSDF
NKFASKKGFHGYLLEQQKWRWDTHSYIGNLETRVHNLLINPNSGVAQNVARYRSVPIK
CKSEDVKRCKATSKELENMATRIASVRQQLLHKKGTLLTSSDNSVIVWQNELAYIEQL
FDRTDQMYNEVLSTLASVNQTFSHLQTSFTAEAAELADRRRLWRRRKENNRKRRKRME
KQLEKIEQRSCELLFHITSRGAYDRVRSHPEMPRIGPSEVNTDMLNGIKSKSEVRPLM
HLLSKGYMTPGAMEMVSQKIQKLECGIKTEAHQQATQVGINSLSINKITAPASELNSI
LPPVTGIASSNMVSSVNSAVTQQSVPTVNLNTQLAK"
polyA_signal 1949..1954
polyA_signal 2564..2569
polyA_signal 3093..3098
BASE COUNT 973 a 695 c 647 g 970 t
ORIGIN
1 ggattttggg ggcataattt tgctattgat caaggatagc gggcccgaat ttactcattt
61 tttagtgact tgacgaggat ccaacagagg tgagtgagga gtgaggtatg tccactctgc
121 cccagcccct ttcccactgc ctgctgaacc aggtacaccc cgctctcaac ctgccccaga
181 caggggtcat cacagacatc aagcccatga tcagtaataa acctcctaca caggaggtca
241 aaccaaacat cctagcaact ggcttgccct atcctccact caacgtgcct aggctacccg
301 tcatgcccaa tgtgtctctg cctagtgtct ctatgccgag tgtgtctatg cccaatgtct
361 ccatgcccaa cgcatccatg cccagtgttt cgatgcccaa tgtgtccatg ccaagtattc
421 ctcatcacaa cttacagggt aacttaggcc aattactcaa caacagtaat tcccaaaaaa
481 tgtcccaaat gaaaaagtgc cccaacgagt ttttacatca gaatccacaa agtgagcgac
541 agcttttcta caacgacgta gccatgcaac tgtataacag tgacttcaac aagtttgctt
601 ccaagaaggg atttcatggc tacctgttag agcaacagaa gtggaggtgg gatacccaca
661 gctacatagg taacctggag actagagtac ataacttgct cattaatcca aacagtgggg
721 ttgcacagaa tgttgctcgc taccgcagtg tccccatcaa atgtaaaagt gaggatgtga
781 agcgatgtaa agccacgtcc aaagagcttg agaacatggc aacccgtatt gccagtgtac
841 ggcagcagct gctacacaaa aagggcacct tgctgacatc cagcgataac agcgttatag
901 tgtggcagaa tgagctagcc tacatagaac agctgtttga caggactgat cagatgtaca
961 atgaggtgtt atctaccctg gcaagtgtca accagacctt ctcccacctt cagacaagct
1021 tcacagcaga agctgcagag ttggcagatc gtaggcgctt gtggaggagg agaaaggaga
1081 acaaccgcaa gagacgcaag cgcatggaga aacaacttga aaagattgag cagcgatctt
1141 gtgagcttct ctttcatatc acatcccggg gagcatatga ccgggtgcgt tcccacccag
1201 agatgcctcg tattggaccc agcgaggtga acacagacat gttaaatggg attaaatcta
1261 aatccgaagt gaggcctctt atgcacctac tcagtaaggg ttacatgacc cctggtgcaa
1321 tggagatggt ctctcaaaag atccaaaaac tagagtgtgg tattaagact gaagcgcacc
1381 aacaggcaac ccaggttggt atcaactccc tgtcgatcaa caaaattaca gcacctgctt
1441 cagagctaaa ctccatactg cctcctgtca ctggaattgc ctcatcaaat atggtgtcat
1501 ctgtaaactc agctgtgaca caacaatcag tgcccacagt aaatcttaac actcaattag
1561 cgaagtaaag acattttaac caagtcacag cgactttgcc acattgccga gtgtttgaca
1621 ttgagtaggc tgtactctac tccacactgt tttaaccaac attgtattat gtatgagcat
1681 actcttacat ggcaaaatgt acatttatta tattatgcag gaatgttgca tcagtttaga
1741 tctaaccaaa acagttttag attacttgtt ctttttttta ccaggtgtac atgtaaattt
1801 taactggtga aatttcactt cgcttgaact ctttaaaaaa tcacaatctt cttcatccta
1861 ctagtaatat acatgtagga tggcccacac ttgggaaaga catcatttac caaattccct
1921 aaagctgtaa tcaaactcat tgcggtggaa taaaaattga ttacttgcct tgccacatat
1981 attacatgaa tcgaattgta agaaattgtc ctgttacttt gttctttatt gatcatgtct
2041 aggactgtcc aaattcaatg gcttagttta tcctggatcg gtgcttaatc ttagactttc
2101 ctcttggctg atttgtcact gattcattgt gtttgtaagt tgtaatagag ctgtagggta
2161 aatctcttct cttttttttt ggggggggtg gaggggaatg ggttgtttgg ggggtgttta
2221 tgttgacttt tccccccata atattccttc atggaccaaa tgtatagaac aattactacc
2281 cgttattaca tgtacatttg tcagtctctt aatgttattt tataatgctt tatttttagg
2341 cagctagagt agaatagttt ctgcattctg gacatttgtt ttactttgaa atatattatg
2401 ttcattcttt ttatcatagc cacttacccg ctacctcgga agtagccagt ctgagacctg
2461 gatttttaaa catggtttaa agaaatgggt gagatatttt aagtgtacca atcatccgaa
2521 aaaaaatgat ctgtgtagtg taaagctaga atgtataccg gtaaataaac tcaaccaaaa
2581 atatttacca ggcattatat aggtaaaccg attaaggagt attaaaaaaa atgaagggta
2641 atattaaatc cctcgtgcag ggcttgcaca gaacctaaat ccgacttagt tccgtgcgag
2701 ccctattcat gcaagtacgt acgtgtgcgt ttactactgg tagtctactc aacaagacga
2761 tatactgttg tatttaactt gcaatatctc tttaataata gaagtaatat ttgaagctca
2821 tattttttta atacattata gccacacatt gaacccctta catcaagagc aaaatttgtt
2881 ttagtgattg gtacactgta aacatttttg ttgttgctga gttcttaata agtgctactt
2941 gatctttgcc atttccttta tggtgaaatc attcaaacta tgtgattacc agtaaccttc
3001 caatcaagtt gaaccatgaa atatggtttg tattgctcgt ctatcattca aattattcag
3061 aatgtgatgg tcatatttca gctccaaaac gaaataaatc gggtcactca agcattgaag
3121 ttgagccatt gctttggctt tagggtgtaa atgattgctt aattttttac taatgattca
3181 atgtttttga caaagcatta aaatcaacag gttcaaattt gcttctggtg tgtaaatcta
3241 attatttatg acaacactaa attttgtaca agtctgaatc aagcc
//