MicroArray Genome Imaging & Clustering Tool

Developed at Davidson College by Laurie Heyer and her undergraduate students.

Paper: MAGIC Tool: Integrated microarray data analysis (Bioinformatics, 2005)

Supplementary Figures: Gridding, Segmentation algorithms, Segmentation browser, Selection criteria


Download MAGIC Tool software

 

Documentation

 

Download small sample files (1 grid and 4 grid) for practice

 

Download BIG tiff files for advanced practice

 

Joe DeRisi et al. diauxic shift experiment (including tiff files, courtesy Pat Brown from Stanford University)

Download gene lists and Information Files

 

Download expression file for practice

 


Related Resources

GCAT Home Page

Genomics Course

Bioinformatics Course: students' online tutorial for microarray data analysis

Teaching Chips

 

This material is based upon work supported by the National Science Foundation under Grants No. 0099720, 0408386, 0520908 and 0627478 . Any opinions, findings, and conclusions or recommendations expressed in this material are those of the author(s) and do not necessarily reflect the views of the National Science Foundation.

 

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© Copyright 2007 Department of Biology, Davidson College, Davidson, NC 28035
Send comments, questions, and suggestions to: laheyer@davidson.edu